Indexed Sequencing Overview Guide (15057455)
The MGH NextGen Sequencing Core | Core Services
TUFTS - TUCF Genomics
mRNA-seq
LUMI-PCR: an Illumina platform ligation-mediated PCR protocol for integration site cloning, provides molecular quantitation of integration sites | Mobile DNA | Full Text
How short inserts affect sequencing performance
Illumina Genome Analyzer sequencing. Adapter-modified, single-stranded... | Download Scientific Diagram
Indexed Sequencing Overview Guide (15057455)
Ultrahigh-Throughput Multiplexing and Sequencing of >500-Base-Pair Amplicon Regions on the Illumina HiSeq 2500 Platform | mSystems
What is index hopping? - The Sequencing Center
Reference genome-independent assessment of mutation density using restriction enzyme-phased sequencing | BMC Genomics | Full Text
The MGH NextGen Sequencing Core | Core Services
Supplementary Methods
Handling of targeted amplicon sequencing data focusing on index hopping and demultiplexing using a nested metabarcoding approach in ecology | Scientific Reports
QIAGEN Bioinformatics Manuals
phylogenetics - Why do NEBNext indexing primers have sequence between the p5 oligo and index? - Bioinformatics Stack Exchange
Biomolecules | Free Full-Text | High-Throughput Identification of Adapters in Single-Read Sequencing Data
Adapter trimming: Why are adapter sequences trimmed from only the 3' ends of reads - Illumina Knowledge
Sequences for primers with Illumina adapters (Nextera transposase... | Download Scientific Diagram
Trimming adapter sequences - is it necessary?
16S rRNA primer designs and amplification strategies | IDT
Sequencing Knowledge Base – CZ Biohub at Stanford
Biotech7005 | The practical material from the course Biotech 7005: Bioinformatics and Systems Modelling
Illumina Sequencing (for Dummies) -An overview on how our samples are sequenced. – kscbioinformatics
Illumina index sequencing - where is my sample? - Enseqlopedia
